Results for 3jad
PDB: 3jad
Gene name: glra1
UniProt: GLRA1_DANRE
EMD:
emd_6344.gz
EMD-6344
Membrane mimetics: micelle; DDM
EMD-6344
Membrane mimetics: micelle; DDM
Cross-sections at different angles
green: density, gray dots: atoms from the all-atom model, lines: membrane boundaries defined by TMDET
The determined edges at each slice and their comparison to TMDET
dots: edges of the gradient, triangles: outliers,
dashed and solid lines: membrane boundaries defined by TMDET and MemBlob (mean(Zi) decreased by the thickness of the interface region (8 Å))
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Boundary values (averages for MemBlob)
| Z (PDBTM) | Z (MemBlob) | Z - 8 | |
| End1 | 17.75 | 37.78 | 29.78 |
| End0 | -17.75 | -30.94 | -22.94 |