Results for 5k7l
PDB: 5k7l
Gene name: CALM1
UniProt: CALM1_HUMAN
EMD:
emd_8215.gz
EMD-8215
Membrane mimetics: micelle; DDM, CHS, POPC:POPE:POPS; DDM, CHS, POPC:POPE:POPS; extraction buffer: DDM-CHS, POPC,E,S
EMD-8215
Membrane mimetics: micelle; DDM, CHS, POPC:POPE:POPS; DDM, CHS, POPC:POPE:POPS; extraction buffer: DDM-CHS, POPC,E,S
Cross-sections at different angles
green: density, gray dots: atoms from the all-atom model, lines: membrane boundaries defined by TMDET
The determined edges at each slice and their comparison to TMDET
dots: edges of the gradient, triangles: outliers,
dashed and solid lines: membrane boundaries defined by TMDET and MemBlob (mean(Zi) decreased by the thickness of the interface region (8 Å))
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Boundary values (averages for MemBlob)
| Z (PDBTM) | Z (MemBlob) | Z - 8 | |
| End1 | 17.25 | 28.39 | 20.39 |
| End0 | -17.25 | -29.00 | -21.00 |