Results for 5u6o
PDB: 5u6o
Gene name: HCN1
UniProt: HCN1_HUMAN
EMD:
emd_8511.gz
EMD-8511
Membrane mimetics: micelle; LMNG, CHS
EMD-8511
Membrane mimetics: micelle; LMNG, CHS
Cross-sections at different angles
green: density, gray dots: atoms from the all-atom model, lines: membrane boundaries defined by TMDET
The determined edges at each slice and their comparison to TMDET
dots: edges of the gradient, triangles: outliers,
dashed and solid lines: membrane boundaries defined by TMDET and MemBlob (mean(Zi) decreased by the thickness of the interface region (8 Å))
[ Download results
Resubmit ]
Manual settings applied
None
Boundary values (averages for MemBlob)
| Z (PDBTM) | Z (MemBlob) | Z - 8 | |
| End1 | 15.75 | 29.28 | 21.28 |
| End0 | -15.75 | -32.89 | -24.89 |