Results for 5u6p
PDB: 5u6p
Gene name: HCN1
UniProt: HCN1_HUMAN
EMD:
emd_8512.gz
EMD-8512
Membrane mimetics: micelle; LMNG, CHS, digitonin; extraction buffer contained LMNG, CHS then SEC buffer containing digitonin
EMD-8512
Membrane mimetics: micelle; LMNG, CHS, digitonin; extraction buffer contained LMNG, CHS then SEC buffer containing digitonin
Cross-sections at different angles
green: density, gray dots: atoms from the all-atom model, lines: membrane boundaries defined by TMDET
The determined edges at each slice and their comparison to TMDET
dots: edges of the gradient, triangles: outliers,
dashed and solid lines: membrane boundaries defined by TMDET and MemBlob (mean(Zi) decreased by the thickness of the interface region (8 Å))
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Boundary values (averages for MemBlob)
| Z (PDBTM) | Z (MemBlob) | Z - 8 | |
| End1 | 17.00 | 31.33 | 23.33 |
| End0 | -17.00 | -33.17 | -25.17 |