Results for 5u70
PDB: 5u70
Gene name: KCNT1
UniProt: KCNT1_CHICK
EMD:
emd_8515.gz
EMD-8515
Membrane mimetics: micelle; POPE:POPG; POPE:POPG
EMD-8515
Membrane mimetics: micelle; POPE:POPG; POPE:POPG
Cross-sections at different angles
green: density, gray dots: atoms from the all-atom model, lines: membrane boundaries defined by TMDET
The determined edges at each slice and their comparison to TMDET
dots: edges of the gradient, triangles: outliers,
dashed and solid lines: membrane boundaries defined by TMDET and MemBlob (mean(Zi) decreased by the thickness of the interface region (8 Å))
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Boundary values (averages for MemBlob)
| Z (PDBTM) | Z (MemBlob) | Z - 8 | |
| End1 | 17.25 | 22.11 | 14.11 |
| End0 | -17.25 | -37.00 | -29.00 |