Results for 5u76
PDB: 5u76
Gene name: KCNT1
UniProt: KCNT1_CHICK
EMD:
emd_8517.gz
EMD-8517
Membrane mimetics: micelle; POPE:POPG; POPE:POPG
EMD-8517
Membrane mimetics: micelle; POPE:POPG; POPE:POPG
Cross-sections at different angles
green: density, gray dots: atoms from the all-atom model, lines: membrane boundaries defined by TMDET
The determined edges at each slice and their comparison to TMDET
dots: edges of the gradient, triangles: outliers,
dashed and solid lines: membrane boundaries defined by TMDET and MemBlob (mean(Zi) decreased by the thickness of the interface region (8 Å))
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Boundary values (averages for MemBlob)
| Z (PDBTM) | Z (MemBlob) | Z - 8 | |
| End1 | 16.50 | 25.72 | 17.72 |
| End0 | -16.50 | -35.11 | -27.11 |