Results for 5wj5
PDB: 5wj5
Gene name: MCOLN1
UniProt: MCLN1_HUMAN
EMD:
emd_8840.gz
EMD-8840
Membrane mimetics: micelle; LMNG or Digitonin Note: Blobs from non-resolved protein regions at side0 made auto-detection problematic
EMD-8840
Membrane mimetics: micelle; LMNG or Digitonin Note: Blobs from non-resolved protein regions at side0 made auto-detection problematic
Cross-sections at different angles
green: density, gray dots: atoms from the all-atom model, lines: membrane boundaries defined by TMDET
The determined edges at each slice and their comparison to TMDET
dots: edges of the gradient, triangles: outliers,
dashed and solid lines: membrane boundaries defined by TMDET and MemBlob (mean(Zi) decreased by the thickness of the interface region (8 Å))
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Boundary values (averages for MemBlob)
| Z (PDBTM) | Z (MemBlob) | Z - 8 | |
| End1 | 16.50 | 18.28 | 10.28 |
| End0 | -16.50 | -27.67 | -19.67 |