Results for 5x0m
PDB: 5x0m
Gene name: None
UniProt: SCNA1_PERAM
EMD:
emd_6698.gz
EMD-6698
Membrane mimetics: micelle; Digitonin Note: More manual adjustment needed because of the noise level
EMD-6698
Membrane mimetics: micelle; Digitonin Note: More manual adjustment needed because of the noise level
Cross-sections at different angles
green: density, gray dots: atoms from the all-atom model, lines: membrane boundaries defined by TMDET
The determined edges at each slice and their comparison to TMDET
dots: edges of the gradient, triangles: outliers,
dashed and solid lines: membrane boundaries defined by TMDET and MemBlob (mean(Zi) decreased by the thickness of the interface region (8 Å))
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Manual settings applied
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Boundary values (averages for MemBlob)
| Z (PDBTM) | Z (MemBlob) | Z - 8 | |
| End1 | 14.00 | 24.50 | 16.50 |
| End0 | -14.00 | -32.72 | -24.72 |