Results for 6c0v
PDB: 6c0v
Gene name: ABCB1
UniProt: MDR1_HUMAN
EMD:
emd_7325.gz
EMD-7325
Membrane mimetics: micelle; fluorinated Fos-Choline-8 Note: More manual adjustment needed because of the noise level
EMD-7325
Membrane mimetics: micelle; fluorinated Fos-Choline-8 Note: More manual adjustment needed because of the noise level
Cross-sections at different angles
green: density, gray dots: atoms from the all-atom model, lines: membrane boundaries defined by TMDET
The determined edges at each slice and their comparison to TMDET
dots: edges of the gradient, triangles: outliers,
dashed and solid lines: membrane boundaries defined by TMDET and MemBlob (mean(Zi) decreased by the thickness of the interface region (8 Å))
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Manual settings applied
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Boundary values (averages for MemBlob)
| Z (PDBTM) | Z (MemBlob) | Z - 8 | |
| End1 | 16.75 | 23.17 | 15.17 |
| End0 | -16.75 | -27.83 | -19.83 |