Results for 6c26
PDB: 6c26
Gene name: OST1
UniProt: OST1_YEAST
EMD:
emd_7336.gz
EMD-7336
Membrane mimetics: micelle; Digitonin Note: More manual adjustment needed because of the noise level; there is missleading density in slices 330-350
EMD-7336
Membrane mimetics: micelle; Digitonin Note: More manual adjustment needed because of the noise level; there is missleading density in slices 330-350
Cross-sections at different angles
green: density, gray dots: atoms from the all-atom model, lines: membrane boundaries defined by TMDET
The determined edges at each slice and their comparison to TMDET
dots: edges of the gradient, triangles: outliers,
dashed and solid lines: membrane boundaries defined by TMDET and MemBlob (mean(Zi) decreased by the thickness of the interface region (8 Å))
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Manual settings applied
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Boundary values (averages for MemBlob)
| Z (PDBTM) | Z (MemBlob) | Z - 8 | |
| End1 | 12.25 | 24.61 | 16.61 |
| End0 | -12.25 | -34.00 | -26.00 |